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Replica Set Data Synchronization

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In order to maintain up-to-date copies of the shared data set, secondary members of a replica set sync or replicate data from other members. MongoDB uses two forms of data synchronization: initial sync to populate new members with the full data set, and replication to apply ongoing changes to the entire data set.

Initial Sync

Initial sync copies all the data from one member of the replica set to another member. A member uses initial sync when the member has no data, such as when the member is new, or when the member has data but is missing a history of the set’s replication.

When you perform an initial sync, MongoDB:

  1. Clones all databases. To clone, the mongod queries every collection in each source database and inserts all data into its own copies of these collections. At this time, _id indexes are also built. The clone process only copies valid data, omitting invalid documents.

  2. Applies all changes to the data set. Using the oplog from the source, the mongod updates its data set to reflect the current state of the replica set.

  3. Builds all indexes on all collections (except _id indexes, which were already completed).

    When the mongod finishes building all index builds, the member can transition to a normal state, i.e. secondary.

Changed in version 3.0: When the clone process omits an invalid document from the sync, MongoDB writes a message to the logs that begins with Cloner: found corrupt document in <collection>.

To perform an initial sync, see Resync a Member of a Replica Set.

Initial Sync and renameCollection

Changed in version 3.2.12.

Starting in MongoDB 3.2.12, if a collection is renamed on the sync source while an initial sync is running, the initial sync for the target member fails and restarts to avoid data corruption (See SERVER-26117). Operations that rename collections include:


Secondary members replicate data continuously after the initial sync. Secondary members copy the oplog from their sync from source and apply these operations in an asynchronous process.

In most cases, secondaries sync from the primary. Secondaries may automatically change their sync from source if needed based on changes in the ping time and state of other members’ replication.

Changed in version 3.2: MongoDB 3.2 replica set members with 1 vote cannot sync from members with 0 votes.

Secondaries avoid syncing from delayed members and hidden members.

If a secondary member has members[n].buildIndexes set to true, it can only sync from other members where buildIndexes is true. Members where buildIndexes is false can sync from any other member, barring other sync restrictions. buildIndexes is true by default.

Multithreaded Replication

MongoDB applies write operations in batches using multiple threads to improve concurrency. MongoDB groups batches by namespace (MMAPv1) or by document id (WiredTiger) and simultaneously applies each group of operations using a different thread. MongoDB always applies write operations to a given document in their original write order.

While applying a batch, MongoDB blocks all read operations. As a result, secondary read queries can never return data that reflect a state that never existed on the primary.

Pre-Fetching Indexes to Improve Replication Throughput


Applies to MMAPv1 only.

With the MMAPv1 storage engine, MongoDB fetches memory pages that hold affected data and indexes to help improve the performance of applying oplog entries. This pre-fetch stage minimizes the amount of time MongoDB holds write locks while applying oplog entries. By default, secondaries will pre-fetch all Indexes.

Optionally, you can disable all pre-fetching or only pre-fetch the index on the _id field. See the secondaryIndexPrefetch setting for more information.